Unfortunately, existing computer programs for sequence alignment are not based explicitly on detecting the homology of nucleotides, and so there is a notable gap in the existing bioinformatics ...

Christopher J. Fallaize, Peter J. Green, Kanti V. Mardia, Stuart Barber, Bayesian protein sequence and structure alignment, Journal of the Royal Statistical Society.

Bioinformatics researchers who perform alignments of long protein sequences face a difficult choice: They can get accurate results in hours (sometimes days), or quick results if they're willing to ...