Healio

Q&A: Researchers create system to engineer synthetic phages

Researchers from New England Biolabs and Yale University have created a system for engineering the first fully synthetic ...

Q&A: Algorithm achieves near end-to-end genome assembly without ultra-long DNA sequencing

Haoyu Cheng, Ph.D., assistant professor of biomedical informatics and data science at Yale School of Medicine, has developed a new algorithm capable of building complete human genomes using standard ...
IEEE

Prediction of High-Level Actions from the Sequence of Atomic Actions in Assembly Line Workstations

Abstract: This study presents a methodology for predicting high-level actions from the sequence of atomic actions in the assembly line workstation. With the rapid development of the automotive ...
IEEE

A Sequence Planning Approach of Models for Sequencing Mixed-Model Assembly Lines

Abstract: Sequence planning of models for a mixed-model assembly line is crucial for the line efficiency. This paper formalized this model sequencing problem based on minimizing the total cost of idle ...
Frontiers

AistSeq: An in-house easy-to-purify Tn5-based plasmid sequencing platform using a compact benchtop sequencer

Here, by combining this analysis pipeline with the simple pA-Tn5 purification and library preparation using E. coli lysate supernatant, we provide a streamlined plasmid verification workflow, an ...
GitHub

A monkeypox virus (MPXV) assembly pipeline using Nextflow for host-removal, reference-based assembly, and generation of sequence quality metrics for Illumina paired-end data ...

Briefly, paired-end reads are mapped to a composite reference sequence composed of the Human hg38 and MPXV reference genome with BWA-MEM and assembled with the iVar consensus tool. The sequence ...